Extracting data in CSV format

Both the Advanced Search and the Batch Search allow summary data to be reported in CSV format, rather than the usual web version. This can be useful if you want to use a script to analyse the data.

Phenotypes are presented using single letters instead of symbols, to facilitate analysis. These are defined below.

Phenotype taxonomy

CSV symbol Symbol Description
RRefractory to deletion (failed disruption)
VDisruption possible (viable mutant)
UNo difference
DDifference from wild-type
DEgress defect
EEnhanced virulence
IInvasion defect
TTranscriptional effect
CAltered cytoadherence
SCell cycle arrest